Sobic.004G252500.1

Description : signal peptide peptidase

Gene families : OG_01_0008435 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008435_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G252500.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G252500.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_68
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_146

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006465	signal peptide processing	ISM	GOs from InterProScan
BP	GO:0006508	proteolysis	ISM	GOs from InterProScan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	ISM	GOs from InterProScan
BP	GO:0016485	protein processing	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051604	protein maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR004634	Pept_S49_pIV	PIRSF	67	671
IPR029045	ClpP/crotonase-like_dom_sf	SUPERFAMILY	366	576
IPR029045	ClpP/crotonase-like_dom_sf	SUPERFAMILY	110	325
IPR002142	Peptidase_S49	Pfam	439	590
IPR002142	Peptidase_S49	Pfam	188	339
IPR004635	Pept_S49_SppA	TIGRFAM	371	586
IPR002142	Peptidase_S49	CDD	370	585

No CAZYmes available for this sequence

External Links

No external refs found!