Sobic.004G260100.2

Description : tetratricopeptide repeat (TPR)-containing protein

Gene families : OG_01_0001632 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001632_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G260100.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G260100.2
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_252
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_69

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006996	organelle organization	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR023231	GSKIP_dom_sf	Gene3D	237	334
IPR007967	GSKIP_dom	Pfam	259	329
IPR011990	TPR-like_helical_dom_sf	Gene3D	968	1244
IPR027523	CLU_prot	Hamap	43	1324
IPR025697	CLU_dom	ProSiteProfiles	354	648
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	978	1090
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	1098	1176
IPR033646	CLU-central	CDD	771	951
IPR023231	GSKIP_dom_sf	SUPERFAMILY	219	338
IPR033646	CLU-central	Pfam	769	950
IPR028275	CLU_N	Pfam	101	178
IPR025697	CLU_dom	Pfam	381	647
IPR027523	CLU_prot	PANTHER	67	1284

No CAZYmes available for this sequence

External Links

No external refs found!