1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.004G262000.1

Sobic.004G262000.1


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0005867 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005867_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G262000.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G262000.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_326
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_218


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
MF GO:0003729 mRNA binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 1 131
IPR000504 RRM_dom SMART 46 118
IPR000504 RRM_dom ProSiteProfiles 45 122
IPR035979 RBD_domain_sf SUPERFAMILY 44 132
IPR000504 RRM_dom Pfam 47 104

No CAZYmes available for this sequence

No external refs found!