1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.004G265600.1

Sobic.004G265600.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0001669 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001669_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G265600.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G265600.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_249
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_179


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 292 404
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 215 371
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 422 656
IPR019734 TPR_repeat ProSiteProfiles 418 451
IPR019734 TPR_repeat ProSiteProfiles 503 536
IPR019734 TPR_repeat Pfam 512 534
IPR011990 TPR-like_helical_dom_sf Gene3D 405 586
IPR011990 TPR-like_helical_dom_sf Gene3D 616 699
IPR011990 TPR-like_helical_dom_sf Gene3D 109 291
IPR019734 TPR_repeat SMART 251 284
IPR019734 TPR_repeat SMART 544 577
IPR019734 TPR_repeat SMART 628 661
IPR019734 TPR_repeat SMART 586 619
IPR019734 TPR_repeat SMART 460 493
IPR019734 TPR_repeat SMART 294 327
IPR019734 TPR_repeat SMART 503 536
IPR019734 TPR_repeat SMART 336 369
IPR019734 TPR_repeat SMART 418 451

No CAZYmes available for this sequence

No external refs found!