Sobic.004G268100.1

Description : ornithine carbamoyltransferase

Gene families : OG_01_0010310 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010310_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G268100.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G268100.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_237
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_171

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004585	ornithine carbamoyltransferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	ISM	GOs from InterProScan
BP	GO:0006591	ornithine metabolic process	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016597	amino acid binding	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
MF	GO:0016743	carboxyl- or carbamoyltransferase activity	ISM	GOs from InterProScan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0031406	carboxylic acid binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043177	organic acid binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR024904	OTCase_ArgI	Hamap	70	372
IPR006131	Asp_carbamoyltransf_Asp/Orn-bd	Pfam	219	369
IPR036901	Asp/Orn_carbamoylTrfase_sf	Gene3D	71	201
IPR036901	Asp/Orn_carbamoylTrfase_sf	SUPERFAMILY	69	372
IPR006130	Asp/Orn_carbamoylTrfase	PRINTS	117	136
IPR006130	Asp/Orn_carbamoylTrfase	PRINTS	324	333
IPR006130	Asp/Orn_carbamoylTrfase	PRINTS	336	359
IPR006130	Asp/Orn_carbamoylTrfase	PRINTS	199	210
IPR002292	Orn/put_carbamltrans	PRINTS	288	298
IPR002292	Orn/put_carbamltrans	PRINTS	350	361
IPR002292	Orn/put_carbamltrans	PRINTS	115	129
IPR002292	Orn/put_carbamltrans	PRINTS	188	202
IPR002292	Orn/put_carbamltrans	PRINTS	148	161
IPR002292	Orn/put_carbamltrans	TIGRFAM	71	371
IPR036901	Asp/Orn_carbamoylTrfase_sf	Gene3D	202	367
IPR006132	Asp/Orn_carbamoyltranf_P-bd	Pfam	71	212

No CAZYmes available for this sequence

External Links

No external refs found!