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Description : endonucleases
Gene families : OG_01_0011559 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011559_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G269600.1 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G269600.1 | No neighbors in network |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_68 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004519 | endonuclease activity | ISM | GOs from InterProScan |
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 282 | 473 |
| IPR027434 | Homing_endonucl | SUPERFAMILY | 571 | 759 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 186 | 220 |
| IPR027434 | Homing_endonucl | Gene3D | 670 | 769 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 477 | 511 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 516 | 543 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 480 | 508 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 195 | 217 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 513 | 547 |
| IPR027434 | Homing_endonucl | Gene3D | 553 | 668 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 377 | 409 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 516 | 544 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 480 | 509 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 195 | 220 |
| IPR004860 | LAGLIDADG_2 | Pfam | 581 | 747 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 373 | 407 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 125 | 281 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 367 | 419 |
No CAZYmes available for this sequence
| No external refs found! |