1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.004G290600.2

Sobic.004G290600.2


Description : WD-40 repeat family protein / beige-related


Gene families : OG_01_0002385 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002385_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G290600.2 No neighbors in network
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G290600.2
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_71


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000409 BEACH_dom ProSiteProfiles 2028 2309
IPR001680 WD40_rpt ProSiteProfiles 2463 2497
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 2439 2747
IPR023362 PH-BEACH_dom Pfam 1915 2013
IPR023362 PH-BEACH_dom CDD 1905 2013
IPR000409 BEACH_dom Pfam 2041 2309
IPR036372 BEACH_dom_sf Gene3D 2029 2309
IPR000409 BEACH_dom CDD 2040 2309
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 2416 2754
IPR000409 BEACH_dom SMART 2040 2309
IPR001680 WD40_rpt SMART 2456 2495
IPR001680 WD40_rpt SMART 2708 2748
IPR001680 WD40_rpt SMART 2544 2583
IPR031570 NBEA/BDCP_DUF4704 Pfam 480 760
IPR023362 PH-BEACH_dom ProSiteProfiles 1902 2013
IPR001680 WD40_rpt Pfam 2465 2494
IPR013320 ConA-like_dom_sf SUPERFAMILY 183 410
IPR036372 BEACH_dom_sf SUPERFAMILY 2020 2309
IPR011993 PH-like_dom_sf Gene3D 1905 2011

No CAZYmes available for this sequence

No external refs found!