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  5. Sobic.004G294300.1

Sobic.004G294300.1


Description : expansin B4


Gene families : OG_01_0004607 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004607_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G294300.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G294300.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_15
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_7


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0019953 sexual reproduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036908 RlpA-like_sf Gene3D 50 190
IPR005795 LolPI PRINTS 214 229
IPR005795 LolPI PRINTS 166 181
IPR005795 LolPI PRINTS 198 213
IPR005795 LolPI PRINTS 104 115
IPR005795 LolPI PRINTS 246 263
IPR005795 LolPI PRINTS 266 283
IPR007112 Expansin/allergen_DPBB_dom SMART 102 184
IPR009009 RlpA-like_DPBB Pfam 103 184
IPR007117 Expansin_CBD ProSiteProfiles 207 290
IPR036749 Expansin_CBD_sf SUPERFAMILY 195 290
IPR036749 Expansin_CBD_sf Gene3D 191 294
IPR036908 RlpA-like_sf SUPERFAMILY 65 213
IPR007117 Expansin_CBD Pfam 196 279
IPR007118 Expan_Lol_pI PRINTS 276 290
IPR007118 Expan_Lol_pI PRINTS 177 193
IPR007118 Expan_Lol_pI PRINTS 65 80
IPR007118 Expan_Lol_pI PRINTS 106 124
IPR007118 Expan_Lol_pI PRINTS 83 101
IPR007118 Expan_Lol_pI PRINTS 235 249
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 84 194

No CAZYmes available for this sequence

No external refs found!