Sobic.004G301400.1

Description : Autophagy-related protein 13

Gene families : OG_01_0013325 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013325_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G301400.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G301400.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_312
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_215

Type	GO Term	Name	Evidence	Source
BP	GO:0000045	autophagosome assembly	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006914	autophagy	ISM	GOs from InterProScan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007033	vacuole organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	None	Extended
BP	GO:0061919	process utilizing autophagic mechanism	None	Extended
BP	GO:0070925	organelle assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1902554	serine/threonine protein kinase complex	None	Extended
CC	GO:1902911	protein kinase complex	None	Extended
BP	GO:1905037	autophagosome organization	None	Extended
CC	GO:1990234	transferase complex	None	Extended
CC	GO:1990316	Atg1/ULK1 kinase complex	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036570	HORMA_dom_sf	Gene3D	17	215
IPR018731	Atg13_N	Pfam	100	208
IPR040182	ATG13	PANTHER	1	535

No CAZYmes available for this sequence

External Links

No external refs found!