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  5. Sevir.1G284400.1

Sevir.1G284400.1


Description : Clathrin adaptor complexes medium subunit family protein


Gene families : OG_01_0012355 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012355_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G284400.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G284400.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_53
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_62


Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport ISM GOs from InterProScan
BP GO:0016192 vesicle-mediated transport ISM GOs from InterProScan
CC GO:0030131 clathrin adaptor complex ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR028565 MHD ProSiteProfiles 177 437
IPR028565 MHD Pfam 167 438
IPR018240 Clathrin_mu_CS ProSitePatterns 166 186
IPR001392 Clathrin_mu PIRSF 4 438
IPR001392 Clathrin_mu PRINTS 357 368
IPR001392 Clathrin_mu PRINTS 168 196
IPR001392 Clathrin_mu PRINTS 248 275
IPR001392 Clathrin_mu PRINTS 317 332
IPR001392 Clathrin_mu PRINTS 102 129
IPR001392 Clathrin_mu PRINTS 15 35
IPR011012 Longin-like_dom_sf SUPERFAMILY 6 142
IPR036168 AP2_Mu_C_sf SUPERFAMILY 166 437
IPR043532 AP2_Mu_N CDD 6 144
IPR043512 Mu2_C CDD 175 437

No CAZYmes available for this sequence

No external refs found!