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  5. Sobic.004G309300.1

Sobic.004G309300.1


Description : nitrite reductase 1


Gene families : OG_01_0013185 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013185_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G309300.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G309300.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_90
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_106


Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
MF GO:0020037 heme binding ISM GOs from InterProScan
MF GO:0051536 iron-sulfur cluster binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045854 NO2/SO3_Rdtase_4Fe4S_sf Gene3D 462 592
IPR005117 NiRdtase/SiRdtase_haem-b_fer Pfam 387 450
IPR005117 NiRdtase/SiRdtase_haem-b_fer Pfam 130 195
IPR045854 NO2/SO3_Rdtase_4Fe4S_sf SUPERFAMILY 466 577
IPR036136 Nit/Sulf_reduc_fer-like_dom_sf SUPERFAMILY 341 477
IPR036136 Nit/Sulf_reduc_fer-like_dom_sf SUPERFAMILY 61 204
IPR045854 NO2/SO3_Rdtase_4Fe4S_sf Gene3D 197 382
IPR006067 NO2/SO3_Rdtase_4Fe4S_dom Pfam 469 575
IPR006067 NO2/SO3_Rdtase_4Fe4S_dom Pfam 205 361
IPR006066 NO2/SO3_Rdtase_FeS/sirohaem_BS ProSitePatterns 510 526
IPR006066 NO2/SO3_Rdtase_FeS/sirohaem_BS PRINTS 466 484
IPR006066 NO2/SO3_Rdtase_FeS/sirohaem_BS PRINTS 510 528
IPR045854 NO2/SO3_Rdtase_4Fe4S_sf SUPERFAMILY 205 361

No CAZYmes available for this sequence

No external refs found!