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  5. Sobic.004G323000.1

Sobic.004G323000.1


Description : CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein


Gene families : OG_01_0001106 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001106_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G323000.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G323000.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_254


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR014044 CAP_domain Pfam 44 167
IPR035940 CAP_sf Gene3D 32 179
IPR001283 CRISP-related PANTHER 2 179
IPR035940 CAP_sf SUPERFAMILY 29 179
IPR018244 Allrgn_V5/Tpx1_CS ProSitePatterns 133 143
IPR014044 CAP_domain SMART 38 175
IPR001283 CRISP-related PRINTS 162 175
IPR001283 CRISP-related PRINTS 107 120
IPR001283 CRISP-related PRINTS 132 148
IPR001283 CRISP-related PRINTS 59 77

No CAZYmes available for this sequence

No external refs found!