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  5. Sobic.004G327400.1

Sobic.004G327400.1


Description : zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein


Gene families : OG_01_0004624 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004624_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G327400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G327400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_2
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_191


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000571 Znf_CCCH ProSiteProfiles 147 174
IPR000467 G_patch_dom ProSiteProfiles 304 363
IPR000467 G_patch_dom Pfam 304 346
IPR000467 G_patch_dom SMART 302 348
IPR036855 Znf_CCCH_sf SUPERFAMILY 148 172
IPR041367 Znf-CCCH_4 Pfam 152 172
IPR000571 Znf_CCCH SMART 147 173

No CAZYmes available for this sequence

No external refs found!