Sobic.004G332700.1

Description : sugar transporter 1

Gene families : OG_01_0000025 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000025_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G332700.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G332700.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_48
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_28

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008643	carbohydrate transport	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015144	carbohydrate transmembrane transporter activity	ISM	GOs from InterProScan
MF	GO:0015145	monosaccharide transmembrane transporter activity	ISM	GOs from InterProScan
BP	GO:0015749	monosaccharide transmembrane transport	ISM	GOs from InterProScan
CC	GO:0016020	membrane	ISM	GOs from InterProScan
MF	GO:0022857	transmembrane transporter activity	ISM	GOs from InterProScan
BP	GO:0034219	carbohydrate transmembrane transport	None	Extended
MF	GO:0051119	sugar transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	ISM	GOs from InterProScan
BP	GO:0071702	organic substance transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR020846	MFS_dom	ProSiteProfiles	30	479
IPR045262	STP/PLT_plant	PANTHER	1	516
IPR044778	MFS_STP/MST-like_plant	CDD	33	477
IPR005829	Sugar_transporter_CS	ProSitePatterns	340	357
IPR036259	MFS_trans_sf	Gene3D	21	493
IPR003663	Sugar/inositol_transpt	TIGRFAM	18	485
IPR005829	Sugar_transporter_CS	ProSitePatterns	144	169
IPR003663	Sugar/inositol_transpt	PRINTS	139	158
IPR003663	Sugar/inositol_transpt	PRINTS	38	48
IPR003663	Sugar/inositol_transpt	PRINTS	392	413
IPR003663	Sugar/inositol_transpt	PRINTS	296	306
IPR003663	Sugar/inositol_transpt	PRINTS	415	427
IPR005828	MFS_sugar_transport-like	Pfam	31	490
IPR036259	MFS_trans_sf	SUPERFAMILY	31	485

No CAZYmes available for this sequence

External Links

No external refs found!