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  5. Sobic.004G334900.1

Sobic.004G334900.1


Description : vesicle-associated membrane protein 713


Gene families : OG_01_0009457 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009457_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G334900.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G334900.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_98
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_139


Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR010908 Longin_dom ProSiteProfiles 8 119
IPR011012 Longin-like_dom_sf SUPERFAMILY 4 126
IPR010908 Longin_dom Pfam 33 116
IPR010908 Longin_dom CDD 6 126
IPR042855 V_SNARE_CC Pfam 132 219
IPR010908 Longin_dom SMART 32 118
IPR042855 V_SNARE_CC ProSiteProfiles 134 194
IPR001388 Synaptobrevin-like PRINTS 159 178
IPR001388 Synaptobrevin-like PRINTS 195 214
IPR001388 Synaptobrevin-like PRINTS 139 158
IPR001388 Synaptobrevin-like ProSitePatterns 152 171

No CAZYmes available for this sequence

No external refs found!