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  5. Sobic.004G336300.2

Sobic.004G336300.2


Description : Adaptor protein complex AP-1, gamma subunit


Gene families : OG_01_0001020 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001020_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G336300.2
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G336300.2
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_327
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_69


Type GO Term Name Evidence Source
CC GO:0005794 Golgi apparatus ISM GOs from InterProScan
BP GO:0006886 intracellular protein transport ISM GOs from InterProScan
BP GO:0016192 vesicle-mediated transport ISM GOs from InterProScan
CC GO:0030117 membrane coat ISM GOs from InterProScan
CC GO:0030121 AP-1 adaptor complex ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013041 Clathrin_app_Ig-like_sf SUPERFAMILY 763 900
IPR008152 Clathrin_a/b/g-adaptin_app_Ig SMART 778 898
IPR011989 ARM-like Gene3D 12 610
IPR016024 ARM-type_fold SUPERFAMILY 41 609
IPR002553 Clathrin/coatomer_adapt-like_N Pfam 43 595
IPR008152 Clathrin_a/b/g-adaptin_app_Ig Pfam 784 898
IPR008153 GAE_dom ProSiteProfiles 781 898
IPR017107 AP1_complex_gsu PIRSF 22 901

No CAZYmes available for this sequence

No external refs found!