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  5. Sobic.004G341700.1

Sobic.004G341700.1


Description : LEUNIG_homolog


Gene families : OG_01_0005399 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005399_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G341700.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G341700.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_326
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_160


Type GO Term Name Evidence Source
MF GO:0003714 transcription corepressor activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 689 729
IPR001680 WD40_rpt SMART 557 596
IPR001680 WD40_rpt SMART 682 720
IPR001680 WD40_rpt SMART 515 554
IPR001680 WD40_rpt SMART 600 640
IPR001680 WD40_rpt SMART 764 803
IPR001680 WD40_rpt SMART 723 762
IPR001680 WD40_rpt SMART 643 679
IPR001680 WD40_rpt ProSiteProfiles 771 803
IPR001680 WD40_rpt ProSiteProfiles 564 596
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 656 803
IPR001680 WD40_rpt Pfam 604 640
IPR001680 WD40_rpt Pfam 559 596
IPR001680 WD40_rpt Pfam 771 803
IPR001680 WD40_rpt Pfam 687 720
IPR001680 WD40_rpt ProSiteProfiles 607 649
IPR006594 LisH Pfam 10 35
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 509 655
IPR006594 LisH ProSiteProfiles 8 40
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 516 803
IPR044716 LEUNIG-like PANTHER 1 803

No CAZYmes available for this sequence

No external refs found!