Sobic.004G345500.1

Description : potassium channel beta subunit 1

Gene families : OG_01_0004340 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004340_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G345500.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G345500.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_185
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_191

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005244	voltage-gated monoatomic ion channel activity	None	Extended
MF	GO:0005249	voltage-gated potassium channel activity	ISM	GOs from InterProScan
MF	GO:0005261	monoatomic cation channel activity	None	Extended
MF	GO:0005267	potassium channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	GOs from InterProScan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0006813	potassium ion transport	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015079	potassium ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022843	voltage-gated monoatomic cation channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901702	salt transmembrane transporter activity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR005399	K_chnl_volt-dep_bsu_KCNAB-rel	PRINTS	161	180
IPR005399	K_chnl_volt-dep_bsu_KCNAB-rel	PRINTS	206	212
IPR005399	K_chnl_volt-dep_bsu_KCNAB-rel	PRINTS	110	120
IPR005399	K_chnl_volt-dep_bsu_KCNAB-rel	PRINTS	271	284
IPR005399	K_chnl_volt-dep_bsu_KCNAB-rel	PRINTS	258	270
IPR005399	K_chnl_volt-dep_bsu_KCNAB-rel	PANTHER	1	328
IPR023210	NADP_OxRdtase_dom	Pfam	16	316
IPR036812	NADP_OxRdtase_dom_sf	Gene3D	1	323
IPR005983	K_chnl_volt-dep_bsu_KCNAB	TIGRFAM	1	316
IPR036812	NADP_OxRdtase_dom_sf	SUPERFAMILY	1	319

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.004G345500.1

Expression Profile

Co-expression Networks

Functional Annotation