Sobic.004G355900.1

Description : oligopeptide transporter 5

Gene families : OG_01_0000239 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000239_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G355900.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G355900.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_164
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_189

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0035673	oligopeptide transmembrane transporter activity	ISM	GOs from InterProScan
MF	GO:0042887	amide transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	ISM	GOs from InterProScan
MF	GO:1904680	peptide transmembrane transporter activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR004648	Oligpept_transpt	PANTHER	10	739
IPR004813	OPT	Pfam	36	700
IPR004813	OPT	TIGRFAM	20	703
IPR004648	Oligpept_transpt	TIGRFAM	16	705

No CAZYmes available for this sequence

External Links

No external refs found!