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  5. Sobic.004G356700.1

Sobic.004G356700.1


Description : Zincin-like metalloproteases family protein


Gene families : OG_01_0003094 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003094_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G356700.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G356700.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_261
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_74


Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity ISM GOs from InterProScan
BP GO:0006508 proteolysis ISM GOs from InterProScan
MF GO:0008233 peptidase activity ISM GOs from InterProScan
MF GO:0008237 metallopeptidase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR024080 Neurolysin/TOP_N Gene3D 126 231
IPR034005 M3A_DCP CDD 140 784
IPR001567 Pept_M3A_M3B_dom Pfam 323 783
IPR024079 MetalloPept_cat_dom_sf Gene3D 455 610
IPR045666 OpdA_N Pfam 121 243
IPR045090 Pept_M3A_M3B PANTHER 93 786
IPR024077 Neurolysin/TOP_dom2 Gene3D 243 779

No CAZYmes available for this sequence

No external refs found!