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  5. Sobic.005G008800.1

Sobic.005G008800.1


Description : HEAT repeat ;WD domain, G-beta repeat protein protein


Gene families : OG_01_0000662 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000662_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G008800.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G008800.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_142
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_116


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0031929 TOR signaling ISM GOs from InterProScan
CC GO:0031931 TORC1 complex ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR016024 ARM-type_fold SUPERFAMILY 446 729
IPR001680 WD40_rpt SMART 1305 1344
IPR001680 WD40_rpt SMART 1022 1062
IPR001680 WD40_rpt SMART 1256 1295
IPR001680 WD40_rpt SMART 1163 1204
IPR001680 WD40_rpt SMART 1116 1160
IPR001680 WD40_rpt SMART 1065 1109
IPR011989 ARM-like Gene3D 466 764
IPR001680 WD40_rpt Pfam 1312 1337
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 1037 1224
IPR029347 Raptor_N SMART 112 265
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 1225 1346
IPR029347 Raptor_N Pfam 113 264
IPR004083 Raptor PANTHER 1 1349
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 1043 1339

No CAZYmes available for this sequence

No external refs found!