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  5. Sobic.005G014600.1

Sobic.005G014600.1


Description : Glycosyl hydrolase superfamily protein


Gene families : OG_01_0005894 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005894_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G014600.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G014600.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_332
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_170


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
BP GO:0071704 organic substance metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 59 412
IPR018087 Glyco_hydro_5_CS ProSitePatterns 221 230
IPR001547 Glyco_hydro_5 Pfam 66 357
IPR045053 MAN-like PANTHER 15 427

No CAZYmes available for this sequence

No external refs found!