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  5. Sobic.005G025100.1

Sobic.005G025100.1


Description : C2H2-like zinc finger protein


Gene families : OG_01_0055223 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0055223_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G025100.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G025100.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_209
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_90


Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013087 Znf_C2H2_type ProSitePatterns 289 309
IPR013087 Znf_C2H2_type SMART 287 309
IPR013087 Znf_C2H2_type SMART 234 256
IPR013087 Znf_C2H2_type ProSiteProfiles 234 261
IPR036236 Znf_C2H2_sf SUPERFAMILY 234 309
IPR044653 AZF1/2/3-like PANTHER 40 396
IPR013087 Znf_C2H2_type ProSitePatterns 236 256
IPR013087 Znf_C2H2_type ProSiteProfiles 287 314

No CAZYmes available for this sequence

No external refs found!