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  5. Sevir.8G221100.2

Sevir.8G221100.2


Description : F-box/RNI-like superfamily protein


Gene families : OG_01_0002779 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002779_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.8G221100.2
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_3


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036047 F-box-like_dom_sf SUPERFAMILY 10 48
IPR032675 LRR_dom_sf Gene3D 532 624
IPR032675 LRR_dom_sf Gene3D 272 355
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 261 285
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 518 543
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 570 595
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 441 466
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 208 233
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 311 336
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 544 569
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 183 207
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 415 440
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 493 517
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 363 388
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 389 414
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 467 492
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 235 260
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 157 182
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 337 362
IPR032675 LRR_dom_sf Gene3D 7 271
IPR001611 Leu-rich_rpt Pfam 467 490
IPR001611 Leu-rich_rpt Pfam 492 515
IPR001611 Leu-rich_rpt Pfam 183 204
IPR032675 LRR_dom_sf Gene3D 356 531

No CAZYmes available for this sequence

No external refs found!