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  5. Sobic.005G034700.1

Sobic.005G034700.1


Description : metalloendopeptidases;zinc ion binding;DNA binding


Gene families : OG_01_0000337 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000337_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G034700.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G034700.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_186
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_220


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013083 Znf_RING/FYVE/PHD Gene3D 668 735
IPR018501 DDT_dom Pfam 463 516
IPR011011 Znf_FYVE_PHD SUPERFAMILY 646 720
IPR019786 Zinc_finger_PHD-type_CS ProSitePatterns 677 718
IPR018501 DDT_dom SMART 460 520
IPR001965 Znf_PHD SMART 1454 1503
IPR001965 Znf_PHD SMART 1961 2008
IPR001965 Znf_PHD SMART 676 719
IPR001965 Znf_PHD SMART 1667 1715
IPR019787 Znf_PHD-finger ProSiteProfiles 674 721
IPR018501 DDT_dom ProSiteProfiles 460 520
IPR011011 Znf_FYVE_PHD SUPERFAMILY 1666 1720
IPR019787 Znf_PHD-finger Pfam 677 719
IPR013083 Znf_RING/FYVE/PHD Gene3D 1661 1721

No CAZYmes available for this sequence

No external refs found!