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  5. Sevir.8G223200.1

Sevir.8G223200.1


Description : Laccase/Diphenol oxidase family protein


Gene families : OG_01_0007444 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007444_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.8G223200.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_217


Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
BP GO:0046274 lignin catabolic process ISM GOs from InterProScan
CC GO:0048046 apoplast ISM GOs from InterProScan
MF GO:0052716 hydroquinone:oxygen oxidoreductase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001117 Cu-oxidase_2nd Pfam 156 305
IPR002355 Cu_oxidase_Cu_BS ProSitePatterns 541 552
IPR008972 Cupredoxin Gene3D 374 581
IPR017761 Laccase TIGRFAM 20 578
IPR034288 CuRO_1_LCC CDD 24 140
IPR034289 CuRO_3_LCC CDD 420 561
IPR008972 Cupredoxin SUPERFAMILY 21 166
IPR008972 Cupredoxin Gene3D 151 330
IPR033138 Cu_oxidase_CS ProSitePatterns 536 556
IPR008972 Cupredoxin SUPERFAMILY 349 578
IPR011707 Cu-oxidase-like_N Pfam 29 141
IPR034285 CuRO_2_LCC CDD 156 304
IPR008972 Cupredoxin SUPERFAMILY 149 344
IPR011706 Cu-oxidase_C Pfam 421 560
IPR008972 Cupredoxin Gene3D 14 140
IPR045087 Cu-oxidase_fam PANTHER 12 579
HMM Family HMM Length Query Length e-Value Query Start Query End
AA1 358 582 3.2e-118 39 552
No external refs found!