Sobic.005G063900.1

Description : Ankyrin repeat family protein

Gene families : OG_01_0010481 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010481_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G063900.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G063900.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_55
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_106

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002110	Ankyrin_rpt	ProSiteProfiles	163	195
IPR002110	Ankyrin_rpt	Pfam	94	187
IPR002110	Ankyrin_rpt	Pfam	246	321
IPR026961	PGG_dom	Pfam	454	559
IPR002110	Ankyrin_rpt	ProSiteProfiles	299	320
IPR002110	Ankyrin_rpt	SMART	369	399
IPR002110	Ankyrin_rpt	SMART	125	154
IPR002110	Ankyrin_rpt	SMART	403	437
IPR002110	Ankyrin_rpt	SMART	163	192
IPR002110	Ankyrin_rpt	SMART	264	295
IPR002110	Ankyrin_rpt	SMART	89	118
IPR002110	Ankyrin_rpt	SMART	299	328
IPR002110	Ankyrin_rpt	SMART	197	227
IPR002110	Ankyrin_rpt	Pfam	363	411
IPR002110	Ankyrin_rpt	ProSiteProfiles	369	393
IPR036770	Ankyrin_rpt-contain_sf	SUPERFAMILY	44	438
IPR036770	Ankyrin_rpt-contain_sf	Gene3D	34	460
IPR002110	Ankyrin_rpt	ProSiteProfiles	264	288

No CAZYmes available for this sequence

External Links

No external refs found!