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Description : Transducin/WD40 repeat-like superfamily protein
Gene families : OG_01_0052867 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0052867_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G067200.2 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G067200.2 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_92 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_12 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 529 | 776 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 460 | 474 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 612 | 626 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 570 | 584 |
| IPR001680 | WD40_rpt | Pfam | 588 | 625 |
| IPR001680 | WD40_rpt | Pfam | 547 | 583 |
| IPR001680 | WD40_rpt | Pfam | 440 | 472 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 552 | 592 |
| IPR001680 | WD40_rpt | SMART | 679 | 719 |
| IPR001680 | WD40_rpt | SMART | 434 | 473 |
| IPR001680 | WD40_rpt | SMART | 728 | 769 |
| IPR001680 | WD40_rpt | SMART | 586 | 625 |
| IPR001680 | WD40_rpt | SMART | 627 | 666 |
| IPR001680 | WD40_rpt | SMART | 545 | 583 |
| IPR040324 | WDR44/Dgr2 | PANTHER | 23 | 934 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 434 | 773 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 570 | 584 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 460 | 474 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 396 | 494 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 441 | 482 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 592 | 626 |
No CAZYmes available for this sequence
| No external refs found! |