Sobic.005G084300.1

No description available

Gene families : OG_01_0010096 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010096_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G084300.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G084300.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_202
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_142

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000677	Chitinase-like	PRINTS	71	89
IPR000677	Chitinase-like	PRINTS	244	263
IPR000677	Chitinase-like	PRINTS	4	17
IPR001579	Glyco_hydro_18_chit_AS	ProSitePatterns	125	133
IPR001223	Glyco_hydro18_cat	Pfam	64	208
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	2	273
IPR001223	Glyco_hydro18_cat	ProSiteProfiles	5	286

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH18	296	287	7.2e-18	24	204

External Links

No external refs found!