Sobic.005G087900.5

Description : Beta-glucosidase, GBA2 type family protein

Gene families : OG_01_0003951 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003951_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G087900.5
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G087900.5
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_220
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_69

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004348	glucosylceramidase activity	ISM	GOs from InterProScan
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006643	membrane lipid metabolic process	None	Extended
BP	GO:0006664	glycolipid metabolic process	None	Extended
BP	GO:0006665	sphingolipid metabolic process	None	Extended
BP	GO:0006672	ceramide metabolic process	None	Extended
BP	GO:0006677	glycosylceramide metabolic process	None	Extended
BP	GO:0006678	glucosylceramide metabolic process	None	Extended
BP	GO:0006680	glucosylceramide catabolic process	ISM	GOs from InterProScan
BP	GO:0006687	glycosphingolipid metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	ISM	GOs from InterProScan
BP	GO:0016042	lipid catabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0019377	glycolipid catabolic process	None	Extended
BP	GO:0030149	sphingolipid catabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044242	cellular lipid catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0046466	membrane lipid catabolic process	None	Extended
BP	GO:0046477	glycosylceramide catabolic process	None	Extended
BP	GO:0046479	glycosphingolipid catabolic process	None	Extended
BP	GO:0046514	ceramide catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1903509	liposaccharide metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR024462	GH116_N	Pfam	99	419
IPR018247	EF_Hand_1_Ca_BS	ProSitePatterns	670	682
IPR012341	6hp_glycosidase-like_sf	Gene3D	587	892
IPR008928	6-hairpin_glycosidase_sf	SUPERFAMILY	515	899
IPR014551	B_Glucosidase_GBA2-typ	PIRSF	33	904
IPR006775	GH116_catalytic	Pfam	534	894

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH116	363	956	1.5e-153	534	895

External Links

No external refs found!

Sobic.005G087900.5

Expression Profile

Co-expression Networks

Functional Annotation