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  5. Sobic.005G099400.1

Sobic.005G099400.1


Description : polyubiquitin 10


Gene families : OG_01_0012174 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012174_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G099400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G099400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_226
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_311


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000626 Ubiquitin-like_dom SMART 68 138
IPR000626 Ubiquitin-like_dom SMART 145 215
IPR000626 Ubiquitin-like_dom SMART 1 65
IPR000626 Ubiquitin-like_dom ProSiteProfiles 145 215
IPR029071 Ubiquitin-like_domsf SUPERFAMILY 64 138
IPR019956 Ubiquitin_dom PRINTS 175 195
IPR019956 Ubiquitin_dom PRINTS 154 174
IPR019956 Ubiquitin_dom PRINTS 196 215
IPR000626 Ubiquitin-like_dom ProSiteProfiles 66 137
IPR029071 Ubiquitin-like_domsf SUPERFAMILY 1 63
IPR000626 Ubiquitin-like_dom ProSiteProfiles 1 62
IPR000626 Ubiquitin-like_dom Pfam 147 214
IPR000626 Ubiquitin-like_dom Pfam 74 138
IPR000626 Ubiquitin-like_dom Pfam 3 62
IPR029071 Ubiquitin-like_domsf SUPERFAMILY 140 214

No CAZYmes available for this sequence

No external refs found!