Sobic.005G110541.1

Description : haloacid dehalogenase-like hydrolase family protein

Gene families : OG_01_0002041 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002041_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G110541.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G110541.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_335
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_208

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
BP	GO:0000097	sulfur amino acid biosynthetic process	None	Extended
MF	GO:0000287	magnesium ion binding	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	GOs from InterProScan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006555	methionine metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009066	aspartate family amino acid metabolic process	None	Extended
BP	GO:0009067	aspartate family amino acid biosynthetic process	None	Extended
BP	GO:0009086	methionine biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016791	phosphatase activity	None	Extended
BP	GO:0019509	L-methionine salvage from methylthioadenosine	ISM	GOs from InterProScan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0043094	cellular metabolic compound salvage	None	Extended
BP	GO:0043102	amino acid salvage	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
MF	GO:0043874	acireductone synthase activity	ISM	GOs from InterProScan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
MF	GO:0046872	metal ion binding	ISM	GOs from InterProScan
BP	GO:0071265	L-methionine biosynthetic process	None	Extended
BP	GO:0071267	L-methionine salvage	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR023214	HAD_sf	Gene3D	385	517
IPR001303	Aldolase_II/adducin_N	Pfam	32	231
IPR036412	HAD-like_sf	SUPERFAMILY	276	517
IPR017714	MethylthioRu-1-P_deHdtase_MtnB	PANTHER	10	517
IPR001303	Aldolase_II/adducin_N	SMART	31	234
IPR017714	MethylthioRu-1-P_deHdtase_MtnB	TIGRFAM	34	238
IPR027505	MtnB_viridiplantae	Hamap	18	517
IPR036409	Aldolase_II/adducin_N_sf	Gene3D	26	251
IPR023943	Enolase-ppase_E1	TIGRFAM	276	516
IPR036409	Aldolase_II/adducin_N_sf	SUPERFAMILY	27	247
IPR023943	Enolase-ppase_E1	CDD	277	498
IPR023943	Enolase-ppase_E1	SFLD	276	516
IPR027514	Salvage_MtnB_euk	Hamap	18	242

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.005G110541.1

Expression Profile

Co-expression Networks

Functional Annotation