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  5. Sobic.005G111700.1

Sobic.005G111700.1


Description : zinc finger protein 1


Gene families : OG_01_0012060 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012060_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G111700.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G111700.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_315
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_121


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000571 Znf_CCCH ProSiteProfiles 356 384
IPR000571 Znf_CCCH ProSiteProfiles 57 85
IPR036855 Znf_CCCH_sf SUPERFAMILY 360 384
IPR000571 Znf_CCCH SMART 102 129
IPR000571 Znf_CCCH SMART 356 383
IPR000571 Znf_CCCH SMART 150 175
IPR000571 Znf_CCCH SMART 310 337
IPR000571 Znf_CCCH SMART 57 84
IPR036855 Znf_CCCH_sf SUPERFAMILY 313 339
IPR036855 Znf_CCCH_sf SUPERFAMILY 148 177
IPR036855 Znf_CCCH_sf SUPERFAMILY 105 131
IPR000571 Znf_CCCH ProSiteProfiles 148 176
IPR000571 Znf_CCCH Pfam 358 383
IPR000571 Znf_CCCH Pfam 105 129
IPR000571 Znf_CCCH Pfam 152 175
IPR000571 Znf_CCCH Pfam 60 83
IPR000571 Znf_CCCH Pfam 312 337
IPR000571 Znf_CCCH ProSiteProfiles 102 130
IPR000571 Znf_CCCH ProSiteProfiles 310 338
IPR036855 Znf_CCCH_sf SUPERFAMILY 62 85

No CAZYmes available for this sequence

No external refs found!