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  5. Sobic.005G124700.1

Sobic.005G124700.1


Description : wall associated kinase 3


Gene families : OG_01_0007058 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007058_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G124700.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G124700.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_207
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_15


Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006468 protein phosphorylation ISM GOs from InterProScan
BP GO:0007166 cell surface receptor signaling pathway ISM GOs from InterProScan
MF GO:0030247 polysaccharide binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045274 WAK-like PANTHER 183 254
IPR017441 Protein_kinase_ATP_BS ProSitePatterns 470 492
IPR008271 Ser/Thr_kinase_AS ProSitePatterns 587 599
IPR000742 EGF-like_dom SMART 369 421
IPR000742 EGF-like_dom SMART 209 256
IPR045274 WAK-like PANTHER 436 780
IPR000719 Prot_kinase_dom ProSiteProfiles 464 745
IPR025287 WAK_GUB Pfam 274 331
IPR025287 WAK_GUB Pfam 26 63
IPR000719 Prot_kinase_dom Pfam 465 732
IPR000719 Prot_kinase_dom SMART 464 739
IPR011009 Kinase-like_dom_sf SUPERFAMILY 447 745
IPR045274 WAK-like PANTHER 16 157
IPR045274 WAK-like PANTHER 347 431

No CAZYmes available for this sequence

No external refs found!