Sevir.8G230800.1

Description : Peptide chain release factor 1

Gene families : OG_01_0005082 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005082_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.8G230800.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.8G230800.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_109
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_111

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003747	translation release factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006415	translational termination	ISM	GOs from InterProScan
MF	GO:0008079	translation termination factor activity	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016149	translation release factor activity, codon specific	ISM	GOs from InterProScan
BP	GO:0022411	cellular component disassembly	None	Extended
BP	GO:0032984	protein-containing complex disassembly	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR005139	PCRF	Pfam	60	253
IPR005139	PCRF	SMART	113	228
IPR045853	Pep_chain_release_fac_I_sf	SUPERFAMILY	60	401
IPR000352	Pep_chain_release_fac_I	ProSitePatterns	277	293
IPR004373	RF-1	TIGRFAM	47	405
IPR000352	Pep_chain_release_fac_I	Pfam	260	370
IPR004373	RF-1	Hamap	51	405

No CAZYmes available for this sequence

External Links

No external refs found!