Sobic.005G137200.1

Description : Chalcone and stilbene synthase family protein

Gene families : OG_01_0000081 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000081_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G137200.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G137200.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_108
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_119

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	ISM	GOs from InterProScan
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001099	Chalcone/stilbene_synt_N	Pfam	9	232
IPR012328	Chalcone/stilbene_synt_C	Pfam	242	392
IPR011141	Polyketide_synthase_type-III	PIRSF	6	393
IPR011141	Polyketide_synthase_type-III	PANTHER	5	393
IPR016039	Thiolase-like	SUPERFAMILY	7	236
IPR018088	Chalcone/stilbene_synthase_AS	ProSitePatterns	160	176
IPR016039	Thiolase-like	Gene3D	240	395
IPR016039	Thiolase-like	Gene3D	1	239
IPR016039	Thiolase-like	SUPERFAMILY	239	391

No CAZYmes available for this sequence

External Links

No external refs found!