Sobic.005G161600.1

Description : Terpenoid cyclases/Protein prenyltransferases superfamily protein

Gene families : OG_01_0021408 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0021408_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G161600.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G161600.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_30
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_118

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0010333	terpene synthase activity	ISM	GOs from InterProScan
MF	GO:0016829	lyase activity	ISM	GOs from InterProScan
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR008930	Terpenoid_cyclase/PrenylTrfase	SUPERFAMILY	249	460
IPR005630	Terpene_synthase_metal-bd	Pfam	479	746
IPR008949	Isoprenoid_synthase_dom_sf	Gene3D	489	805
IPR008930	Terpenoid_cyclase/PrenylTrfase	SUPERFAMILY	70	162
IPR001906	Terpene_synth_N	Pfam	239	436
IPR036965	Terpene_synth_N_sf	Gene3D	72	486
IPR008949	Isoprenoid_synthase_dom_sf	SUPERFAMILY	476	802

No CAZYmes available for this sequence

External Links

No external refs found!