Sobic.005G164000.1

Description : O-Glycosyl hydrolases family 17 protein

Gene families : OG_01_0001164 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001164_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G164000.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G164000.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_231
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_56

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000490	Glyco_hydro_17	Pfam	26	349
IPR012946	X8	Pfam	393	451
IPR000490	Glyco_hydro_17	ProSitePatterns	264	277
IPR044965	Glyco_hydro_17_plant	PANTHER	2	485
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	26	349
IPR012946	X8	SMART	373	465

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
CBM43	83	498	6.2e-20	392	464
GH17	311	498	3.4e-98	26	349

External Links

No external refs found!