Sobic.005G177500.1

Description : chitinase A

Gene families : OG_01_0002054 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002054_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G177500.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G177500.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_69
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_31

Type	GO Term	Name	Evidence	Source
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR045321	Cts1-like	CDD	44	303
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	42	306
IPR001223	Glyco_hydro18_cat	ProSiteProfiles	43	307
IPR001223	Glyco_hydro18_cat	Pfam	45	211

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH18	296	308	1.1e-09	45	208

External Links

No external refs found!