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  5. Sobic.005G193600.1

Sobic.005G193600.1


Description : 3-ketoacyl-CoA synthase 2


Gene families : OG_01_0000017 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000017_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G193600.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G193600.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_191
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_93


Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
MF GO:0016746 acyltransferase activity ISM GOs from InterProScan
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR016039 Thiolase-like SUPERFAMILY 91 304
IPR016039 Thiolase-like SUPERFAMILY 310 491
IPR012392 3-ktacl-CoA_syn PIRSF 24 531
IPR012392 3-ktacl-CoA_syn PANTHER 25 524
IPR016039 Thiolase-like Gene3D 122 491
IPR013601 FAE1_typ3_polyketide_synth Pfam 93 375
IPR013747 ACP_syn_III_C Pfam 409 490

No CAZYmes available for this sequence

No external refs found!