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  5. Sobic.005G194400.1

Sobic.005G194400.1


Description : ribulose-bisphosphate carboxylases


Gene families : OG_01_0010725 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010725_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G194400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G194400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_27
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_22


Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding ISM GOs from InterProScan
BP GO:0015977 carbon fixation ISM GOs from InterProScan
MF GO:0016984 ribulose-bisphosphate carboxylase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000685 RuBisCO_lsu_C Pfam 145 188
IPR036422 RuBisCO_lsu_N_sf Gene3D 16 138
IPR017443 RuBisCO_lsu_fd_N Pfam 31 135
IPR036422 RuBisCO_lsu_N_sf SUPERFAMILY 16 140
IPR036376 RuBisCO_lsu_C_sf SUPERFAMILY 139 189
IPR033966 RuBisCO PANTHER 1 202
IPR036376 RuBisCO_lsu_C_sf Gene3D 140 199

No CAZYmes available for this sequence

No external refs found!