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  5. Sobic.005G196100.1

Sobic.005G196100.1


Description : polyol/monosaccharide transporter 5


Gene families : OG_01_0002348 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002348_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G196100.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G196100.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_170


Type GO Term Name Evidence Source
MF GO:0015144 carbohydrate transmembrane transporter activity ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
MF GO:0022857 transmembrane transporter activity ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036259 MFS_trans_sf Gene3D 30 507
IPR045262 STP/PLT_plant PANTHER 22 507
IPR036259 MFS_trans_sf SUPERFAMILY 21 502
IPR005829 Sugar_transporter_CS ProSitePatterns 92 108
IPR003663 Sugar/inositol_transpt PRINTS 405 426
IPR003663 Sugar/inositol_transpt PRINTS 129 148
IPR003663 Sugar/inositol_transpt PRINTS 306 316
IPR003663 Sugar/inositol_transpt PRINTS 428 440
IPR005828 MFS_sugar_transport-like Pfam 39 505
IPR020846 MFS_dom ProSiteProfiles 38 494
IPR003663 Sugar/inositol_transpt TIGRFAM 31 500

No CAZYmes available for this sequence

No external refs found!