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  5. Sobic.005G206700.1

Sobic.005G206700.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0007520 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007520_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G206700.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G206700.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_223
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_167


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 58 99
IPR001680 WD40_rpt SMART 275 320
IPR001680 WD40_rpt SMART 190 230
IPR001680 WD40_rpt SMART 2 47
IPR001680 WD40_rpt SMART 51 90
IPR001680 WD40_rpt SMART 136 187
IPR001680 WD40_rpt SMART 233 272
IPR001680 WD40_rpt SMART 93 133
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 6 322
IPR019775 WD40_repeat_CS ProSitePatterns 259 273
IPR020472 G-protein_beta_WD-40_rep PRINTS 307 321
IPR020472 G-protein_beta_WD-40_rep PRINTS 259 273
IPR020472 G-protein_beta_WD-40_rep PRINTS 174 188
IPR001680 WD40_rpt ProSiteProfiles 155 187
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 12 319
IPR001680 WD40_rpt Pfam 237 272
IPR001680 WD40_rpt Pfam 97 133
IPR001680 WD40_rpt Pfam 279 320
IPR024977 Apc4-like_WD40_dom Pfam 155 207
IPR001680 WD40_rpt ProSiteProfiles 240 281
IPR001680 WD40_rpt ProSiteProfiles 282 322

No CAZYmes available for this sequence

No external refs found!