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  5. Sobic.005G222500.1

Sobic.005G222500.1


Description : phospholipase D alpha 1


Gene families : OG_01_0033971 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0033971_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G222500.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G222500.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_162
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_24


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004630 phospholipase D activity ISM GOs from InterProScan
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0046470 phosphatidylcholine metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR024632 PLipase_D_C Pfam 750 820
IPR035892 C2_domain_sf SUPERFAMILY 42 157
IPR000008 C2_dom ProSiteProfiles 1 125
IPR001736 PLipase_D/transphosphatidylase SMART 676 703
IPR001736 PLipase_D/transphosphatidylase SMART 334 370
IPR000008 C2_dom SMART 10 124
IPR001736 PLipase_D/transphosphatidylase ProSiteProfiles 676 703
IPR035892 C2_domain_sf Gene3D 5 155
IPR001736 PLipase_D/transphosphatidylase ProSiteProfiles 334 370
IPR011402 PLipase_D_pln PIRSF 1 828
IPR000008 C2_dom Pfam 33 123
IPR001736 PLipase_D/transphosphatidylase Pfam 677 703
IPR001736 PLipase_D/transphosphatidylase Pfam 337 370
IPR015679 PLipase_D_fam PANTHER 2 838

No CAZYmes available for this sequence

No external refs found!