Sobic.005G223775.1

Description : NB-ARC domain-containing disease resistance protein

Gene families : OG_01_0002118 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002118_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G223775.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G223775.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_55
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_6

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005758	mitochondrial intermembrane space	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031970	organelle envelope lumen	None	Extended
CC	GO:0031974	membrane-enclosed lumen	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043233	organelle lumen	None	Extended
MF	GO:0043531	ADP binding	ISM	GOs from InterProScan
CC	GO:0070013	intracellular organelle lumen	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR042197	Apaf_helical	Gene3D	326	405
IPR027417	P-loop_NTPase	SUPERFAMILY	153	399
IPR027417	P-loop_NTPase	Gene3D	154	321
IPR041118	Rx_N	Pfam	7	95
IPR002182	NB-ARC	Pfam	173	395
IPR038005	RX-like_CC	CDD	4	134

No CAZYmes available for this sequence

External Links

No external refs found!