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  5. Sobic.005G231300.1

Sobic.005G231300.1


Description : Pathogenesis-related thaumatin superfamily protein


Gene families : OG_01_0017848 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0017848_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.005G231300.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.005G231300.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_224
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_740


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001938 Thaumatin Pfam 49 263
IPR001938 Thaumatin PIRSF 4 269
IPR037176 Osmotin/thaumatin-like_sf Gene3D 44 263
IPR001938 Thaumatin ProSiteProfiles 42 263
IPR001938 Thaumatin SMART 45 263
IPR001938 Thaumatin PANTHER 23 264
IPR037176 Osmotin/thaumatin-like_sf SUPERFAMILY 44 264
IPR001938 Thaumatin PRINTS 92 103
IPR001938 Thaumatin PRINTS 44 56
IPR001938 Thaumatin PRINTS 144 160
IPR001938 Thaumatin PRINTS 253 262
HMM Family HMM Length Query Length e-Value Query Start Query End
GH152 216 270 1.9e-82 49 263
No external refs found!