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  5. Sobic.006G010800.1

Sobic.006G010800.1


Description : Calcium-binding EF-hand family protein


Gene families : OG_01_0009522 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009522_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G010800.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G010800.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_17


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002048 EF_hand_dom Pfam 147 212
IPR002048 EF_hand_dom Pfam 59 118
IPR002048 EF_hand_dom CDD 59 120
IPR011992 EF-hand-dom_pair SUPERFAMILY 53 214
IPR002048 EF_hand_dom ProSiteProfiles 183 218
IPR002048 EF_hand_dom ProSiteProfiles 55 90
IPR002048 EF_hand_dom SMART 187 215
IPR002048 EF_hand_dom SMART 59 87
IPR002048 EF_hand_dom SMART 149 177
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 68 80
IPR002048 EF_hand_dom CDD 149 209
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 196 208

No CAZYmes available for this sequence

No external refs found!