Sobic.006G030100.3

Description : acetyl-CoA carboxylase 2

Gene families : OG_01_0000499 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000499_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G030100.3
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G030100.3
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_19
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_116

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003989	acetyl-CoA carboxylase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016421	CoA carboxylase activity	None	Extended
MF	GO:0016874	ligase activity	ISM	GOs from InterProScan
MF	GO:0016885	ligase activity, forming carbon-carbon bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
MF	GO:0046872	metal ion binding	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR005481	BC-like_N	Pfam	132	251
IPR011764	Biotin_carboxylation_dom	ProSiteProfiles	131	638
IPR013537	AcCoA_COase_cen	Pfam	839	1554
IPR011761	ATP-grasp	ProSiteProfiles	284	478
IPR005479	CbamoylP_synth_lsu-like_ATP-bd	Pfam	298	481
IPR011054	Rudment_hybrid_motif	SUPERFAMILY	522	635
IPR000089	Biotin_lipoyl	ProSiteProfiles	765	839
IPR011053	Single_hybrid_motif	SUPERFAMILY	771	841
IPR016185	PreATP-grasp_dom_sf	SUPERFAMILY	101	254
IPR034733	AcCoA_carboxyl_beta	Pfam	1658	2211
IPR005482	Biotin_COase_C	SMART	527	634
IPR013815	ATP_grasp_subdomain_1	Gene3D	299	361
IPR005482	Biotin_COase_C	Pfam	528	634
IPR005479	CbamoylP_synth_lsu-like_ATP-bd	ProSitePatterns	445	452
IPR000089	Biotin_lipoyl	Pfam	782	838
IPR029045	ClpP/crotonase-like_dom_sf	SUPERFAMILY	1896	2288
IPR029045	ClpP/crotonase-like_dom_sf	SUPERFAMILY	1567	1892
IPR011762	COA_CT_N	ProSiteProfiles	1561	1902
IPR011763	COA_CT_C	ProSiteProfiles	1906	2222

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.006G030100.3

Expression Profile

Co-expression Networks

Functional Annotation