Sobic.006G069300.1

Description : alpha carbonic anhydrase 1

Gene families : OG_01_0000778 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000778_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G069300.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G069300.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_160
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_105

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004089	carbonate dehydratase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016836	hydro-lyase activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036398	CA_dom_sf	SUPERFAMILY	39	277
IPR001148	CA_dom	ProSiteProfiles	38	281
IPR041891	Alpha_CA_prokaryot-like	CDD	47	277
IPR001148	CA_dom	SMART	40	279
IPR036398	CA_dom_sf	Gene3D	37	286
IPR018338	Carbonic_anhydrase_a-class_CS	ProSitePatterns	136	152
IPR023561	Carbonic_anhydrase_a-class	PANTHER	7	286
IPR001148	CA_dom	Pfam	47	279

No CAZYmes available for this sequence

External Links

No external refs found!