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  5. Sobic.006G075600.1

Sobic.006G075600.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0008206 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008206_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G075600.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G075600.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_270
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_80


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR020472 G-protein_beta_WD-40_rep PRINTS 397 411
IPR020472 G-protein_beta_WD-40_rep PRINTS 355 369
IPR020472 G-protein_beta_WD-40_rep PRINTS 268 282
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 246 661
IPR001680 WD40_rpt ProSiteProfiles 249 282
IPR001680 WD40_rpt Pfam 248 280
IPR001680 WD40_rpt Pfam 332 368
IPR001680 WD40_rpt Pfam 374 410
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 235 571
IPR001680 WD40_rpt SMART 330 368
IPR001680 WD40_rpt SMART 371 410
IPR001680 WD40_rpt SMART 412 451
IPR001680 WD40_rpt SMART 624 663
IPR001680 WD40_rpt SMART 506 543
IPR001680 WD40_rpt SMART 466 502
IPR001680 WD40_rpt SMART 242 281
IPR001680 WD40_rpt ProSiteProfiles 337 368
IPR001680 WD40_rpt ProSiteProfiles 522 552
IPR040324 WDR44/Dgr2 PANTHER 6 671
IPR001680 WD40_rpt ProSiteProfiles 377 411

No CAZYmes available for this sequence

No external refs found!